Reactions. 31,782 solid-state and 9,518 sol-gel syntheses text-mined from published papers (Kononova et al., Scientific Data 2019; Ceder group, github.com/CederGroupHub/text-mined-synthesis_public), streamed once in a fixed shuffled order. reactions have a product with two or more elements up to plutonium, making distinct element combinations. Pressing means compacting powders into pellets ( reactions); cooling means an explicit cooling or quenching step (); top heating temperatures were reported for reactions.
The 18 scored element properties. XenonPy element table (Yamada et al., 2019), read through the ElementEmbeddings package (Onwuli et al., 2023). Each property is placed on its own power scale (Box–Cox), chosen without looking at the predictions so that its values spread symmetrically: close to a log scale (like pH) for the electronegativities, electron affinity, heat of formation and thermal conductivity; stronger than log for first ionization energy, whose few huge values (He, Ne, F) would otherwise dominate; about a square root for the radii, melting and boiling points, density and the heats of fusion and evaporation; and stretched (power above 1) for heat capacity and covalent radius, whose values bunch at the top. A single log scale for everything scores 1.3 points worse; these per-property scales score 0.6 points better and lift the map's own positions from 84.2% to 85.8%. Confidence weights are computed in each property's original units, so the comparison is fair. Two definitions are cleaned: electron affinity is kept only for the 71 elements with a measured value in the mendeleev database (23 filled-in or unbound-anion estimates removed, e.g. He −19.7 eV, Xe −0.056 eV, U 3.1 eV), and heat capacity is per mole of atoms (H₂, N₂, O₂, F₂, Cl₂, Br₂ and I₂ halved).
Heating and cooling properties at 1 atm. Melting point and heat of fusion are kept only where the element melts at atmospheric pressure: helium (solidifies only above 2.5 MPa), carbon and arsenic (both sublime; their tabulated melting values were measured under pressure) are left out. Boiling point is the temperature at which the element turns to gas at 1 atm, so carbon's is its sublimation point, 3915 K (the tabulated 5100 K is a high-pressure value). Heat of evaporation is per mole of atoms, like heat capacity (the seven diatomic elements were per mole of molecules, and the nitrogen and oxygen entries were wrong). Two table errors found on the way were corrected: neon melts at 24.56 K, not 48 K, and its heat of fusion is 0.335 kJ/mol, not 0.164.
Read-out sources (none contains a scored property):
- Crystal-structure vectors: CHGNet (Deng et al., 2023) and CrystaLLM (Antunes et al., 2024) element embeddings, via ElementEmbeddings; 8 principal components each.
- Electron configuration, oxidation states, Mendeleev / Pettifor / Glawe numbers, geochemical class, lattice type: mendeleev Python package (Mentel, 2014–2025).
- Isotopes: all 3,186 known isotopes of these 94 elements in the mendeleev isotope table (masses, abundances, half-lives, spins), summarised per element as the number of known and stable isotopes, the half-life of the longest-lived isotope, the spread of isotope masses in natural abundance, and the nuclear spin of the main isotope. They are also drawn on the map: each element carries a ring of its isotopes in order of mass number, stable ones larger and more opaque, radioactive ones fainter the shorter they live (hover one for its half-life and abundance). Chemistry does not tell isotopes apart, so they share their element's place. No isotope mass is used directly, so atomic mass is still predicted, not looked up. They add 0.1 points overall and lift atomic mass from 87.8% to 91.1%.
- More measured element properties: work function, Debye temperature, thermal expansion, Miedema's electronegativity and electron density, and magnetic moment, from the elementy package (Forrest; compiled from standard handbooks). They raise held-out accuracy by 0.5 points, most for heat of fusion (+2.6), thermal conductivity (+1.9) and melting point (+1.7), the properties tied to how stiffly atoms are bound.
- Test only: Rahm–Zeng–Hoffmann electronegativity (average valence-electron binding energy, elements 1–96; J. Am. Chem. Soc. 2019). The map never saw it, yet predicts it held out with rank agreement 0.85 from positions alone (0.89 with element data), against 0.89–0.94 for the two electronegativity scales it was trained on. The largest disagreements (Gd, the noble gases, H) are where that scale's own authors note its dependence on the chosen valence state.
- Second compilation: PubChem periodic table (U.S. National Library of Medicine, Nov 2026), compared value by value with the training table. 51–98% of entries are identical copies; where they differ, PubChem matched standard references (CRC, NIST) for 32 values that were wrong in the training table and these were corrected: melting points of Li (553.7 K → 453.65 K), B, Cr, Pm, Ir and Pa; boiling points of 19 elements, among them Li (1118 → 1615 K), Si (2628 → 3538 K), Be, Fe, Ni, Sn, Ba, Hf and W; astatine's ionization energy (11.15 → 9.32 eV, measured 2013); gallium's electron affinity; and the Pauling electronegativity of W, Lu and U. Where PubChem disagrees on heavy-metal ionization energies (Ta, Os, Th, Fr) it is the one rounding, and the table was kept.
- Test only: SuperCon2 (Foppiano et al., NIMS, 2022; 40,324 superconductor records text-mined from 37,700 papers). Of 2,237 compositions with a critical temperature measured at ambient pressure, a compound's three map coordinates order the temperatures correctly 68% of the time (rank agreement 0.48), measured element data 72%. Superconductivity depends on electronic and lattice details beyond an average position; high-temperature superconductors (36% iron-based, 22% cuprates among those above 30 K) sit apart from the rest by about half the spread of all compounds.
- Cross-checks for compounds (not used in training): OQMD (Kirklin et al., 2015; 394,993 compositions), Alexandria (Schmidt et al.; 116,623 stable compositions, formation energies derived from its own elemental references) and JARVIS-DFT (Choudhary et al., 2025 release; 65,233), all via the JARVIS-Tools collection; experimental formation enthalpies from high-temperature calorimetry (Kim, Meschel, Nash and Chen, Scientific Data 2017; 1,131) and the SGTE SSUB database (1,643); experimental band gaps (Zhuo, Mansouri Tehrani and Brgoch, 2018; 4,602 compositions).
- Calculated atomic-orbital energies: pymatgen (Ong et al., 2013), from NIST atomic reference data (density-functional calculations).
Extra training planes (tested as additional perspectives, never scored): orbital energies, oxidation states and ordering scales as above; sound velocity, thermal expansion and mineral hardness from pymatgen's element table; calculated band gap and magnetic moment of each element's solid from the Magpie element data (Ward et al., 2016, OQMD calculations) shipped with matminer.
Compound energies. Materials Project formation energies, 2019.04.01 snapshot (133,420 structures; Chen et al., MEGNet, figshare 8097992), reduced to 95,559 compositions using each one's most stable form.
Benchmarks only (shown in tables, not used by the map): SkipAtom (Antunes et al., 2022), Mat2Vec (Tshitoyan et al., 2019) and ORB element vectors, via ElementEmbeddings.